{
  "_id": "6a1edae9b401979e7340f6bc",
  "Package": "CSCNet",
  "Type": "Package",
  "Title": "Fitting and Tuning Regularized Cause-Specific Cox Models with\nElastic-Net Penalty",
  "Version": "0.1.4",
  "Authors@R": "c(person(given = \"Shahin\",family = \"Roshani\",role = c(\"aut\", \"cre\", \"cph\"),email = \"s.roshani@nki.nl\",comment = c(ORCID = \"0000-0001-7518-157X\")))",
  "Maintainer": "Shahin Roshani <s.roshani@nki.nl>",
  "Description": "Flexible tools to fit, tune and obtain absolute risk\npredictions from regularized cause-specific cox models with\nelastic-net penalty.",
  "License": "GPL (>= 3)",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.3",
  "VignetteBuilder": "knitr",
  "URL": "https://shahin-roshani.github.io/CSCNet/,\nhttps://github.com/Shahin-Roshani/CSCNet",
  "Config/testthat/edition": "3",
  "BugReports": "https://github.com/Shahin-Roshani/CSCNet/issues",
  "Config/pak/sysreqs": "cmake libfontconfig1-dev libfreetype6-dev\nlibfribidi-dev make libharfbuzz-dev libicu-dev libjpeg-dev\nlibpng-dev libtiff-dev libuv1-dev libwebp-dev libxml2-dev\nlibssl-dev libx11-dev zlib1g-dev",
  "Repository": "https://shahin-roshani.r-universe.dev",
  "Date/Publication": "2026-01-20 22:21:42 UTC",
  "RemoteUrl": "https://github.com/shahin-roshani/cscnet",
  "RemoteRef": "HEAD",
  "RemoteSha": "7bb570c7156c7319a7d35daa713e28d29494b136",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-20 08:59:32 UTC",
    "User": "root"
  },
  "Author": "Shahin Roshani [aut, cre, cph] (ORCID:\n<https://orcid.org/0000-0001-7518-157X>)",
  "MD5sum": "4d418dc62e045e13beb068874af7d1cf",
  "_user": "shahin-roshani",
  "_type": "src",
  "_file": "CSCNet_0.1.4.tar.gz",
  "_fileid": "14fd2559978aa15c71960b13809ca0a9962a8ed0c23e05f7490867000480dc6a",
  "_filesize": 177034,
  "_sha256": "14fd2559978aa15c71960b13809ca0a9962a8ed0c23e05f7490867000480dc6a",
  "_created": "2026-05-20T08:59:32.000Z",
  "_published": "2026-06-02T13:30:17.467Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79081931608,
      "time": 255,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7105718270"
    },
    {
      "job": 79081931957,
      "time": 268,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7105722825"
    },
    {
      "job": 79081931311,
      "time": 218,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7105692814"
    },
    {
      "job": 79081931348,
      "time": 152,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7105674192"
    },
    {
      "job": 79081931398,
      "time": 279,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7105626445"
    },
    {
      "job": 79081930549,
      "time": 153,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7359067245"
    },
    {
      "job": 79081931308,
      "time": 148,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7105680839"
    },
    {
      "job": 79081931530,
      "time": 139,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7105676957"
    },
    {
      "job": 79081931580,
      "time": 169,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7105688108"
    }
  ],
  "_buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/shahin-roshani/cscnet",
  "_commit": {
    "id": "7bb570c7156c7319a7d35daa713e28d29494b136",
    "author": "Shahin Roshani <31321269+Shahin-Roshani@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Version: 0.1.4",
    "time": 1768947702
  },
  "_maintainer": {
    "name": "Shahin Roshani",
    "email": "s.roshani@nki.nl",
    "orcid": "0000-0001-7518-157X"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "tidyverse",
      "version": ">= 1.3.1",
      "role": "Depends"
    },
    {
      "package": "magrittr",
      "version": ">= 2.0.3",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "version": ">= 1.0.9",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "version": ">= 0.3.4",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "version": ">= 1.4.0",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "version": ">= 3.1.7",
      "role": "Imports"
    },
    {
      "package": "survival",
      "version": ">= 3.3-1",
      "role": "Imports"
    },
    {
      "package": "prodlim",
      "version": ">= 2019.11.13",
      "role": "Imports"
    },
    {
      "package": "riskRegression",
      "version": ">= 2022.03.22",
      "role": "Imports"
    },
    {
      "package": "glmnet",
      "version": ">= 4.1-4",
      "role": "Imports"
    },
    {
      "package": "caret",
      "version": ">= 6.0-92",
      "role": "Imports"
    },
    {
      "package": "recipes",
      "version": ">= 1.3.1",
      "role": "Imports"
    },
    {
      "package": "parallelly",
      "version": ">= 1.46.0",
      "role": "Imports"
    },
    {
      "package": "future",
      "version": ">= 1.26.1",
      "role": "Imports"
    },
    {
      "package": "furrr",
      "version": ">= 0.3.0",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "shahin-roshani",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-51",
      "n": 10
    },
    {
      "week": "2025-52",
      "n": 10
    },
    {
      "week": "2026-01",
      "n": 2
    },
    {
      "week": "2026-04",
      "n": 7
    }
  ],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "shahin-roshani",
      "count": 12,
      "uuid": 31321269
    }
  ],
  "_userbio": {
    "uuid": 31321269,
    "type": "user",
    "name": "Shahin Roshani",
    "description": "PhD Student at The Netherlands Cancer Institute (NKI) & Amsterdam UMC (Location: VUmc)"
  },
  "_downloads": {
    "count": 189,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CSCNet"
  },
  "_devurl": "https://github.com/shahin-roshani/cscnet",
  "_pkgdown": "https://shahin-roshani.github.io/CSCNet/",
  "_searchresults": 4,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/CSCNet.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/shahin-roshani/cscnet",
  "_realowner": "shahin-roshani",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2022-08-16"
    },
    {
      "version": "0.1.1",
      "date": "2022-10-06"
    },
    {
      "version": "0.1.2",
      "date": "2022-11-08"
    },
    {
      "version": "0.1.3",
      "date": "2026-01-08"
    },
    {
      "version": "0.1.4",
      "date": "2026-01-20"
    }
  ],
  "_exports": [
    "penCSC",
    "tune_penCSC"
  ],
  "_help": [
    {
      "page": "penCSC",
      "title": "penCSC",
      "topics": [
        "penCSC"
      ]
    },
    {
      "page": "predict.penCSC",
      "title": "predict.penCSC",
      "topics": [
        "predict.penCSC"
      ]
    },
    {
      "page": "predictRisk.penCSC",
      "title": "predictRisk.penCSC",
      "topics": [
        "predictRisk.penCSC"
      ]
    },
    {
      "page": "print.penCSC",
      "title": "print.penCSC",
      "topics": [
        "print.penCSC"
      ]
    },
    {
      "page": "print.tune_penCSC",
      "title": "print.tune_penCSC",
      "topics": [
        "print.tune_penCSC"
      ]
    },
    {
      "page": "tune_penCSC",
      "title": "tune_penCSC",
      "topics": [
        "tune_penCSC"
      ]
    }
  ],
  "_pkglogo": "https://github.com/shahin-roshani/cscnet/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/shahin-roshani/cscnet/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "backports",
    "base64enc",
    "bit",
    "bit64",
    "blob",
    "broom",
    "bslib",
    "cachem",
    "callr",
    "caret",
    "cellranger",
    "checkmate",
    "class",
    "cli",
    "clipr",
    "clock",
    "cluster",
    "cmprsk",
    "codetools",
    "colorspace",
    "conflicted",
    "cpp11",
    "crayon",
    "curl",
    "data.table",
    "DBI",
    "dbplyr",
    "diagram",
    "digest",
    "doParallel",
    "dplyr",
    "dtplyr",
    "e1071",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "forcats",
    "foreach",
    "foreign",
    "Formula",
    "fs",
    "furrr",
    "future",
    "future.apply",
    "gargle",
    "generics",
    "ggplot2",
    "glmnet",
    "globals",
    "glue",
    "googledrive",
    "googlesheets4",
    "gower",
    "gridExtra",
    "gtable",
    "hardhat",
    "haven",
    "highr",
    "Hmisc",
    "hms",
    "htmlTable",
    "htmltools",
    "htmlwidgets",
    "httr",
    "ids",
    "ipred",
    "isoband",
    "iterators",
    "jquerylib",
    "jsonlite",
    "KernSmooth",
    "knitr",
    "labeling",
    "lattice",
    "lava",
    "lifecycle",
    "listenv",
    "lubridate",
    "magrittr",
    "MASS",
    "Matrix",
    "MatrixModels",
    "memoise",
    "mets",
    "mime",
    "ModelMetrics",
    "modelr",
    "multcomp",
    "mvtnorm",
    "nlme",
    "nnet",
    "numDeriv",
    "openssl",
    "parallelly",
    "pillar",
    "pkgconfig",
    "plotrix",
    "plyr",
    "polspline",
    "prettyunits",
    "pROC",
    "processx",
    "prodlim",
    "progress",
    "progressr",
    "proxy",
    "ps",
    "Publish",
    "purrr",
    "quantreg",
    "R6",
    "ragg",
    "ranger",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "readr",
    "readxl",
    "recipes",
    "rematch",
    "rematch2",
    "reprex",
    "reshape2",
    "riskRegression",
    "rlang",
    "rmarkdown",
    "rms",
    "rpart",
    "rstudioapi",
    "rvest",
    "S7",
    "sandwich",
    "sass",
    "scales",
    "selectr",
    "shape",
    "SparseM",
    "sparsevctrs",
    "SQUAREM",
    "stringi",
    "stringr",
    "survival",
    "sys",
    "systemfonts",
    "textshaping",
    "TH.data",
    "tibble",
    "tidyr",
    "tidyselect",
    "tidyverse",
    "timechange",
    "timeDate",
    "timereg",
    "tinytex",
    "tzdb",
    "utf8",
    "uuid",
    "vctrs",
    "viridisLite",
    "vroom",
    "withr",
    "xfun",
    "xml2",
    "yaml",
    "zoo"
  ],
  "_vignettes": [
    {
      "source": "CSCNet.Rmd",
      "filename": "CSCNet.html",
      "title": "CSCNet vignette",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Regularized cause-specific cox and absolute risk predictions",
        "Fitting regularized cause-specific cox models",
        "Predictions and semi-parametric estimates of absolute risk",
        "Tuning the hyper-parameters",
        "Automatic specification of hyper-parameters sequences",
        "Pre-processing within resampling"
      ],
      "created": "2022-08-03 22:11:29",
      "modified": "2026-01-20 22:20:12",
      "commits": 11
    }
  ],
  "_score": 4.301029995663981,
  "_indexed": true,
  "_nocasepkg": "cscnet",
  "_universes": [
    "shahin-roshani"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.4",
      "date": "2026-05-20T09:03:02.000Z",
      "distro": "noble",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "adb023b4da6c5dd877409cd9656c395fc0eab8f965005b75d332c2b42e3de88d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.4",
      "date": "2026-05-20T09:03:18.000Z",
      "distro": "noble",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "09fdba57fd2254ad8663c1055aec106f762c700b37af79b008dafb91b9a7d741",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.4",
      "date": "2026-05-20T09:02:08.000Z",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "6b72354f5e54dade1887116a25c9e9149f012be4a9e733a87b4fc0f09cd392f7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.4",
      "date": "2026-05-20T09:01:28.000Z",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "b8ef6de9f319e84d3b9a6d3b732767ba82fbdc4ffe08ef3b42d08d38cf3aa7ae",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-05-20T09:01:18.000Z",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "72c9bf2f54dd20636b42786d0c74f3c4b3819dbad3da48d49868f3c13f52d04a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-05-20T09:01:02.000Z",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "0bf219677b080ea4116f0cd58176acbfe92074f2ae13d0646d6fc079c1f32ff3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.4",
      "date": "2026-05-20T09:01:29.000Z",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "00d6a2d43c418a18863ac774a44bd2c9a4f8a6cd2d1d6b13d5125b834c32f756",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.4",
      "date": "2026-06-02T13:29:41.000Z",
      "commit": "7bb570c7156c7319a7d35daa713e28d29494b136",
      "fileid": "69b7e14367b05d592cb5286f9eb66bd3adfbc12005f38796ba9b19dfd33f4231",
      "status": "success",
      "buildurl": "https://github.com/r-universe/shahin-roshani/actions/runs/26152144972"
    }
  ]
}